Domeo Annotation Toolkit
The Domeo Annotation Toolkit was an extensible web application for creating and sharing ontology-based stand-off annotations on HTML or XML documents. Users could add annotations manually, or via the tool's full or partial automation options. It also included functions for controlling access authorization and control for both personal and community annotations.
Documentation
Attributes
- Type of analysis: Annotating Enrichment
- Type of license: Free Open Source
- Background Processing: Doesn't Run in Background
- Web Usable: Software you Download and Install
- Ease of Use: Easy
- Warning: No longer supported
- TaDiRAH Goals: Enrichment
- TaDiRAH Methods: Annotating
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More information about Domeo is available via the following publications:
Ciccarese P, Ocana M, Clark, T. \"Open semantic annotation of scientific publications using DOMEO.\" Biomed Semantics 2012 Apr 24;3 (Suppl 1):S1. Web.
Ciccarese P, Ocana M, Castro LJG, Das S, Clark, T. \"An Open Annotation Ontology for Science on Web 3.0\". J Biomed Semantics 2011, 2 (Suppl 2):S4 (17 May 2011). Web.
Ciccarese P, Ocana M, Clark, T. \"DOMEO: a web-based tool for semantic annotation of online documents.\" Bio-Ontologies 2011, Vienna, Austria. Web.
Clark T, Ciccarese P, Attwood T, de Waard A and Pettifer S. \"A Round-Trip to the Annotation Store: Open, Transferable Semantic Annotation of Biomedical Publications.\" Beyond the PDF (workshop, January 19-21, 2011 University of California San Diego. Web.
Ciccarese P, Ocana M, Das S, Clark T. \"AO: An Open Annotation Ontology for Science on the Web.\" Bio-ontologies 2010, Boston, USA. Web.
The website for this tool is currently down and hasn't been functional since 2016. An archived version of it is available here: https://web.archive.org/web/20160304220036/http://swan.mindinformatics.org/